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Papers citing Predictive chemistry: machine learning for reaction deployment, reaction development, and reaction discovery

  1. Assessment of fine-tuned large language models for real-world chemistry and material science applications

    Chemical Science · 2024-11-22

    Joren Van Herck, M.V. Gil, Kevin Maik Jablonka, Alex Abrudan, Andy S. Anker, Mehrdad Asgari, Ben J. Blaiszik, Antonio Buffo, Leander Choudhury, Clémence Corminbœuf, Hilal Daglar, Amir Mohammad Elahi, Ian T Foster, Susana García, Matthew Garvin, Guillaume Godin, Lydia L. Good, Jianan Gu, Noémie Xiao Hu, Xin Jin, Tanja Junkers, Seda Keskın, Tuomas P. J. Knowles, Rubén Laplaza, Michele Lessona, Sauradeep Majumdar, Hossein Mashhadimoslem, Ruaraidh D. McIntosh, Seyed Mohamad Moosavi, Beatriz Mouriño, Francesca Nerli, C. Pevida, Neda Poudineh, Mahyar Rajabi Kochi, Kadi Liis Saar, Fahimeh Hooriabad Saboor, Morteza Sagharichiha, K. J. Schmidt, Jiale Shi, Elena Simone, Dennis Svatunek, Marco Taddei, Igor V. Tetko, D. Tolnai, Sahar Vahdatifar, Jonathan K. Whitmer, D. C. Florian Wieland, Regine Willumeit‐Römer, Andreas Züttel, Berend Smit

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  2. An automatic end-to-end chemical synthesis development platform powered by large language models

    Nature Communications · 2024-11-23

    Yixiang Ruan, Chenyin Lu, Ning Xu, Yuchen He, Yi-Xin Chen, Jian Zhang, Jun Xuan, Jian‐Zhang Pan, Qun Fang, Hanyu Gao, Xiaodong Shen, Ning Ye, Qiang Zhang, Yiming Mo

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  3. Reacon: a template- and cluster-based framework for reaction condition prediction

    Chemical Science · 2024-12-06

    Zihan Wang, Kangjie Lin, Jianfeng Pei, Luhua Lai

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  4. Fundamental understanding of fluorophenol-derived dual organocatalysts for ring-opening polymerization of lactide

    New Journal of Chemistry · 2024-12-13

    Guo Fengzhen, Jiawen Dai, Shaoju Cao, Yaling Yin, Zhenjiang Li, Jie Sun, Jin Huang, Kai Guo

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  5. Computational tools for the prediction of site- and regioselectivity of organic reactions

    Chemical Science · 2025-01-01

    Lukas M. Sigmund, Michele Assante, Magnus J. Johansson, Per‐Ola Norrby, Kjell Jorner, Mikhail Kabeshov

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  6. Data-driven recommendation of agents, temperature, and equivalence ratios for organic synthesis

    Chemical Science · 2025-01-01

    Xiaoqi Sun, Jiannan Liu, Babak A. Mahjour, Klavs F. Jensen, Connor W. Coley

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  7. Electronic effects in early transition metal catalyzed olefin polymerization: challenges in featurization and descriptor strengths and weaknesses

    Dalton Transactions · 2025-01-01

    Christian Ehm, Gianluigi Galasso, Antonio Vittoria, Pietro Oriente, Luigi Maiale, Peter H. M. Budzelaar, Roberta Cipullo, Vincenzo Busico

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  8. Investigation of arene and heteroarene nitration supported by high-throughput experimentation and machine learning

    Digital Discovery · 2025-01-01

    Taline Kerackian, Clément Wespiser, Matthieu Daniel, Éric Pasquinet, Eugénie Romero

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  9. Accelerating the Development of Sustainable Catalytic Processes through Data Science

    Organic Process Research & Development · 2025-01-02

    Jason M. Stevens, Jacob M. Ganley, Matthew J. Goldfogel, Ariel Furman, Steven R. Wisniewski

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  10. Data Checking of Asymmetric Catalysis Literature Using a Graph Neural Network Approach

    Molecules · 2025-01-16

    Eduardo Aguilar-Bejarano, Viraj Deorukhkar, Simon Woodward

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  11. Data Science-Driven Discovery of Optimal Conditions and a Condition-Selection Model for the Chan–Lam Coupling of Primary Sulfonamides

    ACS Catalysis · 2025-01-24

    Shivaani S. Gandhi, Giselle Z. Brown, Santeri Aikonen, Jordan S. Compton, Paulo Neves, Jesus I. Martinez Alvarado, Iulia I. Strambeanu, Kristi A. Leonard, Abigail G. Doyle

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  12. An active representation learning method for reaction yield prediction with small-scale data

    Communications Chemistry · 2025-02-10

    Peng-Xiang Hua, Zhen Huang, Zheyuan Xu, Qiang Zhao, Chen-Yang Ye, Yi‐Feng Wang, Yun‐He Xu, Yao Fu, Hu Ding

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  13. C–H Aminoalkylation of 5-Membered Heterocycles: Influence of Descriptors, Data Set Size, and Data Quality on the Predictiveness of Machine Learning Models and Expansion of the Substrate Space Beyond 1,3-Azoles

    The Journal of Organic Chemistry · 2025-02-11

    Stephanie Felten, Cyndi Qixin He, Marion H. Emmert

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  14. minChemBio: Expanding Chemical Synthesis with Chemo-Enzymatic Pathways Using Minimal Transitions

    ACS Synthetic Biology · 2025-02-14

    Mohit Anand, Vikas Upadhyay, Costas D. Maranas

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  15. Bidirectional Chemical Intelligent Net: A unified deep learning–based framework for predicting chemical reaction

    Chinese Chemical Letters · 2025-02-19

    Xi Xue, Kai Chen, Hanyu Sun, Xiangying Liu, Xue Liu, Shize Li, Jingjie Yan, Yu Peng, Mohammad S. Mubarak, Ahmed Al‐Harrasi, Hai‐Yu Hu, Yafeng Deng, Xiandao Pan, Xiaojian Wang

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  16. Advancing extrapolative predictions of material properties through learning to learn using extrapolative episodic training

    Communications Materials · 2025-02-22

    Kohei Noda, Araki Wakiuchi, Yoshihiro Hayashi, Ryo Yoshida

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  17. Challenging Reaction Prediction Models to Generalize to Novel Chemistry

    ACS Central Science · 2025-03-12

    John Bradshaw, Anji Zhang, Babak A. Mahjour, David Graff, Marwin Segler, Connor W. Coley

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  18. Deep-Learning-Assisted Understanding of the Self-Assembly of Miktoarm Star Block Copolymers

    ACS Nano · 2025-03-12

    Congcong Cui, Yuanyuan Cao, Lu Han

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  19. Unified Deep Learning of Molecular and Protein Language Representations with T5ProtChem

    Journal of Chemical Information and Modeling · 2025-04-08

    Thomas Kelly, Song Xia, Jieyu Lü, Yingkai Zhang

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  20. A meta-learning approach for selectivity prediction in asymmetric catalysis

    Nature Communications · 2025-04-15

    Sukriti Singh, José Miguel Hernández-Lobato

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  21. Research progress of machine learning in the field of photocatalysis applications

    Journal of Industrial and Engineering Chemistry · 2025-04-24

    Kun Li, Haoyuan Du, Lei Liu, Hang Yang, Junfei Fang, Dong Li

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  22. Data accessibility in the chemical sciences: an analysis of recent practice in organic chemistry journals

    Beilstein Journal of Organic Chemistry · 2025-05-02

    Sally Bloodworth, Cerys Willoughby, Simon John Coles

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  23. Development of Robust, Efficient and Scalable Transition Metal Catalyzed Transformations: Translation of Reactions from Micromole to Multi-Kilogram Scale Processes

    ACS Catalysis · 2025-05-02

    Jacob M. Ganley, Candice L. Joe, Eric M. Simmons

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  24. Machine learning approach for photocatalysis: An experimentally validated case study of photocatalytic dye degradation

    Journal of Environmental Management · 2025-05-14

    Hassan Refat H. Ali, Muhammad Yasir, Hamza Ul Haq, Ali Can Güler, Milan Masař, Muhammad Nouman Aslam Khan, Michal Machovský, Vladimír Sedlařík, Ivo Kuřitka

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  25. Simple Units Integration Brings New Reactivity: Neighboring Group Effect in the Synthesis of Polyfunctionalized 5‐Alkenyl‐3‐furanones from γ‐Hydroxyl Enal

    Chinese Journal of Chemistry · 2025-05-16

    Jun Tan, Chengyan Xie, Youai Qiu, Dengke Ma

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  26. ASKCOS: Open-Source, Data-Driven Synthesis Planning

    Accounts of Chemical Research · 2025-05-21

    Zhengkai Tu, Sourabh J. Choure, Mun Hong Fong, Jihye Roh, Itai Levin, Kevin Yu, Joonyoung F. Joung, Nathan N. Morgan, Shih‐Cheng Li, Xiaoqi Sun, Huiqian Lin, Mark Murnin, Jordan P. Liles, Thomas J. Struble, Michael William-Patrick Fortunato, Mengjie Liu, William H. Green, Klavs F. Jensen, Connor W. Coley

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  27. Applying Active Learning toward Building a Generalizable Model for Ni-Photoredox Cross-Electrophile Coupling of Aryl and Alkyl Bromides

    Journal of the American Chemical Society · 2025-05-22

    Lucas W. Souza, Nathan D. Ricke, Braden C. Chaffin, Michael William-Patrick Fortunato, Shutian Jiang, Cihan Soylu, Thomas Caya, Sii Hong Lau, Katherine A. Wieser, Abigail G. Doyle, Kian L. Tan

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  28. Benchmarking molecular conformer augmentation with context-enriched training: graph-based transformer versus GNN models

    Journal of Cheminformatics · 2025-05-22

    Cecile Valsecchi, Jose A. Arjona-Medina, Natalia Dyubankova, Нугманов Рамиль Ирекович

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  29. Hybridised mechanistic and machine learning digital twins for modelling and optimising chemical processes in flow: A comparative analysis of parallel and series-based hybridisation

    Chemical Engineering Journal Advances · 2025-06-02

    Nur Aliya Nasruddin, Nazrul Islam, Sergio Vernuccio, John Oluwagbemiga Oyekan

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  30. Optimal Compound Downselection To Promote Diversity and Parallel Chemistry

    Journal of Chemical Information and Modeling · 2025-06-02

    Jenna C. Fromer, Alexandra D. Volkova, Connor W. Coley

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  31. Optimization of Catalysts Using Computational Chemistry, Machine Learning, and Cheminformatics

    Unknown journal · 2025-06-23

    David Dalmau, Juan V. Alegre‐Requena

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  32. Predicting Reactivity with Machine Learning

    Unknown journal · 2025-06-23

    Lauriane Jacot‐Descombes, Kjell Jorner

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  33. Optimizing Vanadium-Catalyzed Epoxidation Reactions: Machine-Learning-Driven Yield Predictions and Data Augmentation

    Journal of Chemical Information and Modeling · 2025-06-24

    José Ferraz-Caetano, Filipe Teixeira, M. Natália D. S. Cordeiro

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  34. Developing a Machine Learning Model for Hydrogen Bond Acceptance Based on Natural Bond Orbital Descriptors

    The Journal of Organic Chemistry · 2025-07-07

    Diêgo Ulysses Melo, Leonardo Martins Carneiro, Mauricio Domingues Coutinho-Neto, Paula Homem‐de‐Mello, Fernando H. Bartoloni

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  35. Unveiling Unusual Reactivity of SO2 and Unusual Type of S–X Long Bonds

    Inorganic Chemistry · 2025-07-08

    Shuai Ma, Longfei Li, Xiaofeng Xie, Peng Wang, He Bai, Kan Yang, Xueqing Song, Henry F. Schaefer

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  36. Discovery of Ni(I) Complexes for CO2 Insertion Enabled by a Machine Learning-Computational-Selection Sequence

    Journal of the American Chemical Society · 2025-07-18

    Julian A. Hueffel, Mathilde Rigoulet, Sebastian Wellig, Theresa Sperger, Jas S. Ward, Kari T. Rissanen, Franziska Schoenebeck

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  37. Accelerated Discovery of Energy Transfer-Catalyzed Dearomative Cycloadditions through a Data-Driven Three-Layer Screening Strategy

    Journal of the American Chemical Society · 2025-07-23

    Debanjan Rana, Carla Hümpel, Ranjini Laskar, Leon Schlosser, Sophie Korgitzsch, Subhabrata Dutta, Constantin Gabriel Daniliuc, Frank Glorius

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  38. Self-driving laboratories with artificial intelligence: An overview of process systems engineering perspective

    Computers & Chemical Engineering · 2025-07-26

    You-Hyun Kim, Hayoung Doo, Daeun Shin, Seo Yoon Lee, Seo Yoon Lee, Yugyeong Roh, Seong‐Eun Park, Heejin Song, Yujin Jung, Hyuk Jun Yoo, Sang Soo Han, Jong Woo Kim, Maximilian O. Besenhard, Ye Seol Lee, Jonggeol Na

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  39. Special Issue: Machine Learning and Data Analysis II

    Symmetry · 2025-07-28

    Marcin Michalak

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  40. Electron flow matching for generative reaction mechanism prediction

    Nature · 2025-08-20

    Joonyoung F. Joung, Mun Hong Fong, Nicholas Casetti, Jordan P. Liles, Ne S. Dassanayake, Connor W. Coley

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  41. Synergy of Machine Learning and High‐Throughput Experimentation: A Road Toward Autonomous Synthesis

    Chemistry - An Asian Journal · 2025-08-28

    Rizvi Syed Aal E Ali, Jiaolong Meng, Xuefeng Jiang

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  42. Optimizing Model Learning Performance on a Challenging Heck Reaction Yield Data Set

    The Journal of Organic Chemistry · 2025-09-03

    Shen Wang, Yining Liu, Weiren Zhao, Yang Li

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  43. Conformation Dependent Features of Bisphosphine Ligands

    The Journal of Organic Chemistry · 2025-09-22

    Brock A. Stenfors, Jamie A. Cadge, Santeri Aikonen, Guilian Luchini, Jessica Wahlers, Kevin Koh, Mikko Muuronen, Maximilian Menche, Mark Pfeifle, Angus B. Keto, Robert S. Paton, Matthew S. Sigman, Olaf Wiest

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  44. Machine Learning‐Assisted Prediction of Ground‐ and Excited‐State Redox Potentials in Iridium(III) Photocatalysts

    Angewandte Chemie International Edition · 2025-10-09

    Xuetao Li, Liyang Fan, Chenxi Xiong, Wenxin Nie, Yujiao Dong, Bo Zhu, Wei Guan

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  45. Machine Learning‐Assisted Prediction of Ground‐ and Excited‐State Redox Potentials in Iridium(III) Photocatalysts

    Angewandte Chemie · 2025-10-09

    Xuetao Li, Liyang Fan, Chenxi Xiong, Wenxin Nie, Yujiao Dong, Bo Zhu, Wei Guan

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  46. Artificial intelligence in chemical reaction engineering

    Elsevier eBooks · 2025-10-17

    Svetlana B. Zueva

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  47. Three-dimensional geometric deep learning for reaction prediction with equivariant graph transformer

    Engineering Applications of Artificial Intelligence · 2025-10-21

    Zhouxiang Wang, Hai-Cheng Yi, Zhuhong You, Qiangguo Jin

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  48. Bond-editing driven electron flow mapping for reaction mechanism modeling

    Chinese Chemical Letters · 2025-11-01

    Pengyu Liang, Bo Liu, Ruiqiang Lu, Ruiqiang Lu, Jing Li, Yi Tan, Huanxiang Liu, Xiaojun Yao

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  49. Machine learning prediction of a chemical reaction over 8 decades of energy

    Physical Review Research · 2025-11-12

    Daniel Julian, Jesús Pérez‐Ríos

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  50. Advancing predictive modeling in computational chemistry through quantum chemistry, molecular mechanics, and machine learning

    Discover Chemistry. · 2025-11-16

    Adekunle Babajide Rowaiye, Abiodun Abidemi Folarin, Tobilola O. Akingbade, Joy C. Okoli, Oluwabukunmi Ifedamola Rowaiye, Temitope Ruth Folorunso, Doofan Bur

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