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Papers citing Inverse molecular design using machine learning: Generative models for matter engineering

  1. Machine Learning in Drug Discovery

    Journal of Chemical Information and Modeling · 2019-03-25

    Günter Klambauer, Sepp Hochreiter, Matthias Rarey

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  2. Equivalence between dropout and data augmentation: A mathematical check

    Neural Networks · 2019-03-27

    Dazhi Zhao, Guozhu Yu, Peng Xu, Maokang Luo

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  3. A Comparative Study of the Efficacy of Local/Global and Parametric/Nonparametric Machine Learning Methods for Establishing Structure–Property Linkages in High-Contrast 3D Elastic Composites

    Integrating materials and manufacturing innovation · 2019-03-28

    Patxi Fernandez-Zelaia, Yuksel C. Yabansu, Surya R. Kalidindi

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  4. Optimization under uncertainty in the era of big data and deep learning: When machine learning meets mathematical programming

    Computers & Chemical Engineering · 2019-03-28

    Chao Ning, Fengqi You

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  5. A universal density matrix functional from molecular orbital-based machine learning: Transferability across organic molecules

    The Journal of Chemical Physics · 2019-04-04

    Lixue Cheng, Matthew Welborn, Anders S. Christensen, Thomas F. Miller

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  6. Deep learning in bioinformatics: Introduction, application, and perspective in the big data era

    Methods · 2019-04-22

    Yu Li, Chao Huang, Lizhong Ding, Zhongxiao Li, Yijie Pan, Xin Gao

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  7. Recognition of polymer configurations by unsupervised learning

    Physical review. E · 2019-04-22

    Xin Xu, Qianshi Wei, Huaping Li, Yuzhang Wang, Yuguo Chen, Ying Lan Jiang

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  8. Toward Design of Novel Materials for Organic Electronics

    Advanced Materials · 2019-04-22

    Pascal Friederich, Artem Fediai, Simon Kaiser, Manuel Konrad, Nicole Jung, Wolfgang Wenzel

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  9. FP2VEC: a new molecular featurizer for learning molecular properties

    Bioinformatics · 2019-04-25

    Woosung Jeon, Dongsup Kim

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  10. Improved Chemical Prediction from Scarce Data Sets via Latent Space Enrichment

    The Journal of Physical Chemistry A · 2019-04-29

    Nicolae C. Iovanac, Brett Matthew Savoie

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  11. Search for Catalysts by Inverse Design: Artificial Intelligence, Mountain Climbers, and Alchemists

    Chemical Reviews · 2019-05-06

    Jessica G. Freeze, H. Ray Kelly, Víctor S. Batista

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  12. Machine learning for the modeling of interfaces in energy storage and conversion materials

    Journal of Physics Energy · 2019-05-09

    Nongnuch Artrith

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  13. Style transfer based data augmentation in material microscopic image processing.

    arXiv (Cornell University) · 2019-05-12

    Boyuan Ma, Xiaoyan Wei, Chuni Liu, Xiaojuan Ban, Haiyou Huang, Hao Henry Wang, Weihua Xue

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  14. All SMILES Variational Autoencoder

    arXiv (Cornell University) · 2019-05-30

    Zaccary Alperstein, Artem R Cherkasov, Jason Tyler Rolfe

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  15. SELFIES: a robust representation of semantically constrained graphs with an example application in chemistry.

    arXiv (Cornell University) · 2019-05-31

    Mario Krenn, Florian Häse, AkshatKumar Nigam, Pascal Friederich, Alán Aspuru‐Guzik

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  16. The digitization of organic synthesis

    Nature · 2019-06-01

    Ian W. Davies

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  17. Experiment Specification, Capture and Laboratory Automation Technology (ESCALATE): a software pipeline for automated chemical experimentation and data management

    MRS Communications · 2019-06-04

    Ian M. Pendleton, Gary Cattabriga, Zhi Li, Mansoor Ani Najeeb, Sorelle A. Friedler, Alexander J. Norquist, Emory M. Chan, Joshua Schrier

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  18. Comparative Exploratory Analysis of Intrinsically Disordered Protein Dynamics Using Machine Learning and Network Analytic Methods

    Frontiers in Molecular Biosciences · 2019-06-12

    Gianmarc Grazioli, Rachel W. Martin, Carter T. Butts

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  19. Deep Learning in Chemistry

    Journal of Chemical Information and Modeling · 2019-06-13

    Adam C. Mater, Michelle L. Coote

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  20. A perspective on inverse design of battery interphases using multi-scale modelling, experiments and generative deep learning

    Energy storage materials · 2019-06-18

    Arghya Bhowmik, Ivano E. Castelli, Juan María García-Lastra, Peter Bjørn Jørgensen, Ole Winther, Tejs Vegge

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  21. Deep Reinforcement Learning for Multiparameter Optimization in de novo Drug Design

    Journal of Chemical Information and Modeling · 2019-06-19

    Niclas Ståhl, Göran Falkman, Alexander Karlsson, Gunnar Mathiason, Jonas Boström

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  22. Machine-learning-assisted discovery of polymers with high thermal conductivity using a molecular design algorithm

    npj Computational Materials · 2019-06-21

    Stephen Wu, Yukiko Kondo, Masa‐aki Kakimoto, Bin Yang, Hironao Yamada, Isao Kuwajima, G. Lambard, Kenta Hongo, Yibin Xu, Junichiro Shiomi, Christoph H. Schick, Junko Morikawa, Ryo Yoshida

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  23. Alchemy: A Quantum Chemistry Dataset for Benchmarking AI Models

    arXiv (Cornell University) · 2019-06-22

    Guangyong Chen, Pengfei Chen, Chang‐Yu Hsieh, Chee‐Kong Lee, Ben Liao, Renjie Liao, Weiwen Liu, Jiezhong Qiu, Qiming Sun, Jie Tang, Richard S. Zemel, Shengyu Zhang

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  24. Artificial intelligence for materials discovery

    MRS Bulletin · 2019-07-01

    Carla Pedro Gomes, Bart Selman, John M. Gregoire

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  25. Probabilistic Representation and Inverse Design of Metamaterials Based on a Deep Generative Model with Semi‐Supervised Learning Strategy

    Advanced Materials · 2019-07-01

    Wei Ma, Feng Cheng, Yihao Xu, Qinlong Wen, Yongmin Liu

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  26. Machine learning approaches for drug virtual screening

    Unknown journal · 2019-07-02

    Benoît Playe

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  27. Enumeration of de novo inorganic complexes for chemical discovery and machine learning

    Molecular Systems Design & Engineering · 2019-07-04

    Stefan Gugler, Jon Paul Janet, Heather J. Kulik

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  28. Thinking Globally, Acting Locally: On the Issue of Training Set Imbalance and the Case for Local Machine Learning Models in Chemistry

    ChemRxiv · 2019-07-08

    Mojtaba Haghighatlari, Ching-Yen Shih, Johannes Hachmann

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  29. Thinking Globally, Acting Locally: On the Issue of Training Set Imbalance and the Case for Local Machine Learning Models in Chemistry

    ChemRxiv · 2019-07-08

    Mojtaba Haghighatlari, Ching-Yen Shih, Johannes Hachmann

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  30. Statistical Analysis and Discovery of Heterogeneous Catalysts Based on Machine Learning from Diverse Published Data

    ChemCatChem · 2019-07-09

    Keisuke Suzuki, Takashi Toyao, Zen Maeno, Satoru Takakusagi, Ken‐ichi Shimizu, Ichigaku Takigawa

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  31. Advancing Drug Discovery via Artificial Intelligence

    Trends in Pharmacological Sciences · 2019-07-15

    H. C. Stephen Chan, Hanbin Shan, Thamani Dahoun, Horst Vogel, Shuguang Yuan

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  32. Ion Transport in Porous Electrodes Obtained by Impedance Using a Symmetric Cell with Predictable Low-Temperature Battery Performance

    The Journal of Physical Chemistry Letters · 2019-07-21

    Nobuhiro Ogihara, Yuichi Itou, Shigehiro Kawauchi

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  33. Embedding Physics Domain Knowledge into a Bayesian Network Enables Layer-by-Layer Process Innovation for Photovoltaics

    arXiv (Cornell University) · 2019-07-25

    Zekun Ren, Felipe Oviedo, Muang Thway, Siyu Isaac Parker Tian, Yue Wang, Hansong Xue, José Darío Perea, Mariya Layurova, Thomas Heumueller, Erik Birgersson, Armin Gerhard Aberle, Christoph Josef Brabec, Rolf Stangl, Shijing Sun, Qianxiao Li, Fen Lin, Ian Marius Peters, Tonio Buonassisi

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  34. Structural phase transitions in a MoWSe2 monolayer: Molecular dynamics simulations and variational autoencoder analysis

    Physical review. B./Physical review. B · 2019-07-30

    Pankaj Rajak, Aravind Krishnamoorthy, Aiichiro Nakano, Priya D. Vashishta, Rajiv K. Kalia

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  35. A Case Study of Deep Reinforcement Learning for Engineering Design: Application to Microfluidic Devices for Flow Sculpting

    Journal of Mechanical Design · 2019-08-01

    Xian Yeow Lee, Aditya Balu, Daniel Stoecklein, Baskar Ganapathysubramanian, Soumik Sarkar

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  36. Fast, efficient fragment-based coordinate generation for Open Babel

    Journal of Cheminformatics · 2019-08-01

    Naruki Yoshikawa, Geoffrey Hutchison

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  37. Accurate and transferable multitask prediction of chemical properties with an atoms-in-molecules neural network

    Science Advances · 2019-08-02

    R.I. Zubatyuk, Justin S. Smith, Jerzy Leszczyński, Olexandr Isayev

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  38. Energy–Geometry Dependency of Molecular Structures: A Multistep Machine Learning Approach

    ACS Combinatorial Science · 2019-08-07

    Ehsan Moharreri, Maryam Pardakhti, Ranjan Srivastava, Steven L. Suib

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  39. Inverse Structural Design of Graphene/Boron Nitride Hybrids by Regressional GAN

    arXiv (Cornell University) · 2019-08-21

    Yuan Dong, Dawei Li, Chi Zhang, Chuhan Wu, Hong Wang, Xin, Ming, Jianlin Jack Cheng, Jian Lin

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  40. Report of the Basic Energy Sciences Roundtable on Liquid Solar Fuels

    Unknown journal · 2019-08-21

    Basic Energy Sciences Roundtable, Bill Tumas, Jillian Lee Dempsey, Tom Mollouk, Shane Ardo, Kara L. Bren, Andrew M. Rappe, Wendy J. Shaw, Héctor D. Abruña, Harry Albert Atwater, Kathy Ayers, Curtis P. Berlinguette, Javier J. Concepcion, Valentino R. Cooper, Daniel V. Esposito, John Gregorie, Leif Hammarström, Sophia Haussener, Frances A. Houle, Sulijo Linic, Hannah S. Shafaat, Yang Shao‐Horn, Wilson A. Smith, Yogi Surendranath, David M. Tiede, Jenny Y. Yang

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  41. Synthetic organic chemistry driven by artificial intelligence

    Nature Reviews Chemistry · 2019-08-21

    A. Filipa Almeida, Rui Moreira, Tiago Rodrigues

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  42. Deep learning enables rapid identification of potent DDR1 kinase inhibitors

    Nature Biotechnology · 2019-09-01

    Alex A. Zhavoronkov, Yan A. Ivanenkov, Alex Aliper, Mark S. Veselov, Vladimir Aladinskiy, Anastasiya V. Aladinskaya, Victor A. Terentiev, Daniil A. Polykovskiy, Maksim Kuznetsov, Arip Asadulaev, Yury Volkov, Artem Zholus, Rim Shayakhmetov, Alexander Zhebrak, Lidiya I. Minaeva, Bogdan A. Zagribelnyy, Lennart H. Lee, Richard Söll, David J. Madge, Xing Li, Tao Guo, Alán Aspuru‐Guzik

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  43. Machine learning in materials science

    InfoMat · 2019-09-01

    Jing Wei, Xuan Chu, Xiangyu Sun, Kun Xu, Hui‐Xiong Deng, Ji-Gen Chen, Zhongming Wei, Ming Lei

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  44. Controlled exploration of chemical space by machine learning of coarse-grained representations

    Physical review. E · 2019-09-03

    Christian Hoffmann, Roberto Menichetti, Kiran H. Kanekal, Tristan Bereau

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  45. DENOPTIM: Software for Computational de Novo Design of Organic and Inorganic Molecules

    Journal of Chemical Information and Modeling · 2019-09-03

    Marco Foscato, Vishwesh Venkatraman, Vidar Remi Jensen

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  46. Emerging role of machine learning in light-matter interaction

    Light Science & Applications · 2019-09-10

    Jiajia Zhou, Bolong Huang, Zheng Yan, Jean‐Claude G. Bünzli

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  47. Learning Drug Functions from Chemical Structures with Convolutional Neural Networks and Random Forests

    Journal of Chemical Information and Modeling · 2019-09-13

    Jesse G. Meyer, Shengchao Liu, Ian J. Miller, Joshua J. Coon, Anthony Gitter

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  48. Direct Steering of de novo Molecular Generation using Descriptor Conditional Recurrent Neural Networks (cRNNs)

    ChemRxiv · 2019-09-23

    Panagiotis-Christos Kotsias, Josep Arús‐Pous, Hongming Chen, Ola Engkvist, Christian Tyrchan, Esben Jannik Bjerrum

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  49. Autonome Entdeckung in den chemischen Wissenschaften, Teil I: Fortschritt

    Angewandte Chemie · 2019-09-25

    Connor W. Coley, Natalie S. Eyke, Klavs F. Jensen

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  50. Autonome Entdeckung in den chemischen Wissenschaften, Teil II: Ausblick

    Angewandte Chemie · 2019-09-25

    Connor W. Coley, Natalie S. Eyke, Klavs F. Jensen

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